rs234475764 SNP Detail

Summary

• ID
  rs234475764
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126920456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGGGGGGA GAGGCCCTGT
  GTCCTATGAA GGCTCTGTGC CTCAGTGTGG GGAATGCCAG GGCCAGGAAG CGAGAGTGGG
  TGGGTTGGTG AGCAGGGGGA GGGAAGAGGG GATAGGAGGA GGGTGTTTTT CAAAGGGGAA
  ACCAGGAAAG GGGATAACAT TGGAAATGTA ATTAAAGAAA ATATCCAATA AAAAAAAAAA
  R
  AGAGAGAGCA CTGACTGCTC TTCCAGGGGT CCTGAGTTCA ATTCCCAGCA ACCACATGGT
  GGCTCACAAC CTTCTGTAAT GGGATCTGAT GCCTTCTTCT GGTGTGTCTA AAGAGAGCAA
  CAGTATACTC ATATACATTT TAGAGAGCTA GAAACAGAGA GAGGGAGAGA CAGAGACAGA
  CAGACAGGAG ATGGAGTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320499208	CHEV_2_126904272	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234475764					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126920456 () rs orientation: forward

Symbol	Name	Function Class
Blvra	biliverdin reductase A	within coordinates
Rr38145	regulatory region 38145	456 bp distal
Rr55562	regulatory region 55562	1944 bp proximal
Tssr19977	transcription start site region 19977	384 bp upstream
Tssr19978	transcription start site region 19978	1656 bp upstream
Tssr19979	transcription start site region 19979	1701 bp upstream
Tssr19980	transcription start site region 19980	1716 bp upstream
Tssr19981	transcription start site region 19981	1933 bp upstream
Tssr19982	transcription start site region 19982	1975 bp upstream