rs234607369 SNP Detail

Summary

• ID
  rs234607369
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:115220208 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAGCCTGT TCCGGGAGAC
  CTTCTTTGCC GGCCCAGTCT TGGGCCTGCT CCTCTTTGTG GTGGGGTTGG CTGTCTTCAT
  CCTTTATGAG GTCCAGGTGA GTGGAGAGAG AGGCCACACC CGACAGGCCC TGGTCATCTA
  CTACAGCTTT AACATTGTCT GTCTGGGGCT CATGACTCTG GTCAGCCTGA GTGGTTCAGT
  M
  ATCTATCGTT TTGACCGTCG GGCCATGGAC CATCATAAGA ACCCGACACG GACCCTGGAT
  GTGGCCCTGC TAATGGGCGC CGCCCTGGGC CAATACGCTA TCTCCTACTA CTCTATCGTG
  GCTGTGGTGG TGGGCTCTCC CAGAGACCTG CAGGGGGCGC TCAACCTGTC CCACGCTCTA
  CTCATGATCG CTCAGCACAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323862369	CHEV_11_115190696	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234607369					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:115220208 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4123	CpG island 4123	within coordinates
Otop2	otopetrin 2	within coordinates
Rr459849	regulatory region 459849	143 bp proximal