rs234621541 SNP Detail

Summary

• ID
  rs234621541
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4030444 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGG TGGGCTGGGA AGAAGCAGTG
  S
  ACTGACCCCG TCCGTCCGGT CTCTA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873063	CHEV_12_3980444	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234621541					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4030444 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4371	CpG island 4371	1101 bp proximal
Efr3b	EFR3 homolog B	within coordinates
Gm59670	predicted gene, 59670	1211 bp upstream
Rr265366	regulatory region 265366	756 bp proximal
Rr369491	regulatory region 369491	1946 bp upstream
Rr403219	regulatory region 403219	921 bp upstream