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rs234650572 SNP Detail
Summary
  • ID
    rs234650572
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr9:43552469 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                ACTATAATCC CAGCACTGCA
    GAAGCAGAGG CTGTCAGATC CCTGGATCTG GCTGACCAGC TAGCCAAGGC TAATGGGTGA
    GCCTCAGGTT CCAATTAGAG ACTCTGTCTC AAAACAATAG GCGGGGCTAA GGATAAAACT
    CAGTAGAGGG CTTGCTTAGG CCTGGCCTGG CACTGATTCC CGGTCATGAA CAAGGGTGGC
    R
    TGGTGTTGTG TACCTGCAAT CCCAACAGTA GTAGGGCAAG AACATAAGGC TCACAAGTTT
    CAAGTTATTC TTGGCAAGGT AGTGAGTTCT AGGTCAGCCT GGGTTATGTG AGACAAAAGA
    AAACAAAAGC AAACCCCTGA GTAGATTGTT GCTAAGGAGC TAGAGGTTGA CCCCTGGCTT
    CTATACACAT GTACATACGT                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss322938896 CHEV_9_43449255 CHEVERUD SCREENING_POP f SNP G A
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs234650572 SNP G A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr9:43552469 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm29961 predicted gene, 29961 836 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory