rs234656625 SNP Detail

Summary

• ID
  rs234656625
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:58891715 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTCT GTGGGGACGC TGGCACGGCC
  A
  CATCAGCAGT GGGCATGCTG GCCTC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323695591	CHEV_11_58814391	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234656625					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:58891715 () rs orientation: forward

Symbol	Name	Function Class
Obscn	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	Coding-NonSynonymous
Rr448071	regulatory region 448071	1531 bp proximal
Tssr101781	transcription start site region 101781	1519 bp downstream
Tssr108186	transcription start site region 108186	1652 bp upstream
Tssr108187	transcription start site region 108187	1608 bp upstream
Tssr108188	transcription start site region 108188	1482 bp upstream
Tssr108189	transcription start site region 108189	1293 bp downstream
Tssr108190	transcription start site region 108190	1309 bp downstream
Tssr108191	transcription start site region 108191	1466 bp downstream
Tssr108192	transcription start site region 108192	1485 bp downstream
Tssr108193	transcription start site region 108193	1502 bp downstream
Tssr108194	transcription start site region 108194	1532 bp downstream