rs234727435 SNP Detail

Summary

• ID
  rs234727435
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181942865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCGT CCCAGAGCAC ACACTTCTCC
  M
  AACCCTTTGG ACATATTTTG AGTAT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320162409	CHEV_1_184045431	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234727435					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181942865 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1142	CpG island 1142	1917 bp distal
Gm33725	predicted gene, 33725	within coordinates
Gm39719	predicted gene, 39719	1659 bp downstream
Rr424860	regulatory region 424860	1260 bp distal
Rr424861	regulatory region 424861	759 bp distal
Rr424862	regulatory region 424862	within coordinates
Rr424863	regulatory region 424863	109 bp proximal
Rr424864	regulatory region 424864	493 bp proximal
Rr424865	regulatory region 424865	587 bp proximal