rs234729294 SNP Detail

Summary

• ID
  rs234729294
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:109723764 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             GGTAGTTCTC TATTCATGGA CACAGAAAAG TCAGGAAAAA GAGAATTCGA
  Y
  ACACGGCAAA CTCCCCAAGT GAATATTAAC CCCTTTACTC CGGATCCTGT           
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322394515	CHEV_7_117268071	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234729294					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109723764 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19571	CpG island 19571	1165 bp distal
Rr400542	regulatory region 400542	376 bp downstream
Tssr68490	transcription start site region 68490	1978 bp downstream
Tssr68491	transcription start site region 68491	1779 bp downstream
Tssr74250	transcription start site region 74250	1654 bp upstream
Tssr74251	transcription start site region 74251	1613 bp upstream
Tssr74252	transcription start site region 74252	1528 bp upstream
Wee1	WEE 1 homolog 1 (S. pombe)	Coding-Synonymous