rs234773187 SNP Detail

Summary

• ID
  rs234773187
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:35947238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTAAAAAG CAGCAAAGAA
  CATTTTAATT TCAAAAGTTA AATACATGCT TTTCATTTAT TAGGTTTTTT TTCAACAAGA
  ATTTTAGTTA ATTGGAATGT TATAAATATA CAGAGTCTAT AAAAGTCCTT GTGAGTGATC
  AGTATGTTGT TTATAATTAT TATTTGGGGA GTATGTTTTG TTTGAGGCAA AGGTCTCACT
  A
  TGTAGACCAG GTTAGCTTTA CTTGACTCTG GCCCCAGTGC TGGGATCAAG GGAGGATGCT
  CTCACACACC ACTTCTAATT TATGAAATTT TCAAACATCT TAAATTTATT TGTATACATA
  CACATGTGTG ATTACAAGGC ACAAATGTAA AGGTCAGAGG TCAAGTGGGG AGTTGTCCTT
  TCTCTTCTAC CATGCTCATT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CZECHII/EiJ	JF1/MsJ	MOLF/EiJ	PWK/PhJ	SPRET/EiJ
ss374257178	MGP_WTSI_8_36543138	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CZECHII/EiJ	JF1/MsJ	MOLF/EiJ	PWK/PhJ	SPRET/EiJ
rs234773187					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss374257178	MGP_WTSI_8_36543138	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:35947238 () rs orientation: forward

Symbol	Name	Function Class
Eri1	exoribonuclease 1	within coordinates
Rr662194	regulatory region 662194	548 bp distal
Rr662195	regulatory region 662195	645 bp distal
Rr662196	regulatory region 662196	550 bp distal
Rr662197	regulatory region 662197	389 bp distal
Tssr80937	transcription start site region 80937	475 bp downstream