rs234802915 SNP Detail

Summary

• ID
  rs234802915
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19192890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCGGGGTCC GTTTAAACTC CGCCCCCTGC CGCCGGCCCT
  TAAAGGTACA GGCCTGGGCT GGCTCCGGGG TTCTGGAGGC GGAGGCAGGT CTGGGCGTGC
  C
  GGTCTCCAGC AAGTTCTCAC AGGAGACTCG GAGTCACGGG CAGAGAGTTG CTGAGGAGAG
  AGCAGAGGGA GATGTTGAGA GATGGGAAAG GGGACACAC                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322117309	CHEV_7_20044314	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234802915					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19192890 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18489	CpG island 18489	within coordinates
Gm23099	predicted gene, 23099	1832 bp downstream
Mark4	MAP/microtubule affinity regulating kinase 4	144 bp upstream
Rr400149	regulatory region 400149	within coordinates
Rr643146	regulatory region 643146	155 bp distal
Rr643147	regulatory region 643147	within coordinates
Tssr64858	transcription start site region 64858	30 bp downstream
Tssr70918	transcription start site region 70918	280 bp upstream
Tssr70919	transcription start site region 70919	226 bp upstream
Tssr70920	transcription start site region 70920	189 bp upstream
Tssr70921	transcription start site region 70921	165 bp upstream
Tssr70922	transcription start site region 70922	109 bp upstream
Tssr70923	transcription start site region 70923	270 bp downstream