rs234805306 SNP Detail

Summary

• ID
  rs234805306
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4274840 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tataccatg gagcctgtgt gggtctgacc
  taggccttct gcatacctgt tatagttctg taacttcatg tttttgtgga actcctaaca
  gtggaagtgg gagttgtttc taactctatt gcctgctctt gggacccatt tctttcctat
  Y
  aagttgcctc atccagttta atatgaggtt tgtgcctagt cttattgcaa cttgatatgc
  tgtgtttggt tgatatccct gggaggcctg cccttttctg aagggaaatg gaggaattga
  tctagggaag agggaaggcg ggcagaggga                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873753	CHEV_12_4224840	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234805306					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4274840 () rs orientation: forward

Symbol	Name	Function Class
Cenpo	centromere protein O	within coordinates
Gm17816	predicted gene, 17816	945 bp upstream
Gm48210	predicted gene, 48210	1479 bp downstream
Tssr112550	transcription start site region 112550	881 bp upstream