rs234828090 SNP Detail

Summary

• ID
  rs234828090
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:33023286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGTGGAAG AGTAGGGGAT
  AGAAGTGAGC AAGTAGGAGG GGGGTCAGGA CACCACAAGA AAAACCACAG AGTCAACTAA
  CCTGGGACCA TGTGGGCTCA CAGAGCCTAG GCCATCAACC CGGGGGTGGG GGGTAGCATG
  CAGGAGCTGG ACCTAGACTC CCCCTACACA TTTGTAGCAA ATGTGCAGCT TGGTCTTCAT
  K
  TGAGACCCCT AACAAGTGGA GTAGAGGTTG TTTCTGTCTT TGTTTCCTGC CTTTGGATCC
  CCTTCCCCTA ACTGAACAGC CTGGTTGGGC CTCAGTGGAA GAGGATGCAC CTAGTCCTAC
  TAGGACTGGA TGCCCCAGGG TGAGGTGGTA CCCAAGTAGG GCTCCCATTC TCTGAGGAGA
  AGAGGAGGGG CCAGTGGGGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325363768	CHEV_17_32941257	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234828090					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:33023286 () rs orientation: forward

Symbol	Name	Function Class
A930009K04Rik	RIKEN cDNA A930009K04 gene	1711 bp downstream
Gm55909	predicted gene, 55909	555 bp downstream
Tssr147401	transcription start site region 147401	1386 bp downstream
Zfp811	zinc finger protein 811	within coordinates