rs234915491 SNP Detail

Summary

• ID
  rs234915491
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:49315641 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACACACA CACACACACA
  CACACACTCC AGTTATTCTT AAAATGCCTT GGCTAACTCA ATGACTGGCC ACTCCTAATC
  CTTCCCCTGC TACCCCAGAC CCAGTTGGGA AAGTGGCCAG AAAACTCACG CGGTAGGTTG
  GCTTTTTTCC TGCTGTTACT GTGTTCCCTT CTTCCTCTGG AGTCCTCTGA TTCTCTCTCT
  R
  CATCCTACCC GCTCAAGTTT CAGTGTCCCG CCCTATACTC AGCAATTGGC TACTGGCGTC
  TTTATTGATA GATCAAAATC CAATAGGGGG CAAAGACCTT CAGTATCAGT AACCACAGAT
  TCCTGATCAA AGCTTCAGAA CCGCCCTCTA CATCCGTCCT GTCTTGCTAG AGTGGGATGG
  TTGCACCACA GGTGGGTGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321795976	CHEV_6_49288706	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234915491					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:49315641 () rs orientation: forward

Symbol	Name	Function Class
Ccdc126	coiled-coil domain containing 126	Intron
Rr629883	regulatory region 629883	within coordinates
Tssr60889	transcription start site region 60889	12 bp upstream