rs234968425 SNP Detail

Summary

• ID
  rs234968425
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:130093197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGTCACAG AAGCGCTGGC TAACCTGTGG
  GTCAGTATCC CATCAGAAGA TCCTAAACTC TACCAGTAAA AAACATGTGG TCATGGTGAT
  TTTAGACTAT GTATTATGTT AGTAGAACTG GACACAGTGG CTAGAGACTT GTTTCTCCCC
  A
  TGTATAAACA AGGCTTGTTT CTGTTTCACA GAGTTAATCA ATCACATAGG CAAAGAGAGA
  CCCTGGAATG ACAACACCAT TTCCCTGGAT GGTAACATCC TTGTGATGTT CTTGTGAGTT
  ATGTTGGAAG TGGCGTGCCT CTCTCTTCCT                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319971097	CHEV_1_132062037	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234968425					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130093197 () rs orientation: forward

Symbol	Name	Function Class
Thsd7b	thrombospondin, type I, domain containing 7B	within coordinates
Tssr8552	transcription start site region 8552	1626 bp downstream
Tssr8553	transcription start site region 8553	1593 bp downstream