rs235010986 SNP Detail

Summary

• ID
  rs235010986
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:83106388 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGACCATGA AGAGGCAGTG
  CTTTGAAGAG CCAGAGGGCC ATGTGTCAAG GTGGATTCTG TAGGAGTAAA AGGCAAGGCT
  TAAAGAGATA AAATTCATAC TGACTCTTTT CCTCAAAGTT ATGGTTAAAT ATGGACCTGT
  CATTCTGATA AAGACTTGTG TGGAGAAAAC TTGAAAAACT AGATCTGAAT TGTTTTTTTT
  K
  TTTTAAAACA TTCCTAAAGT CGTCAGTTCC CCACAATATA ATTGACACCC ATGTTGACTG
  TAACTCTCAT AATAAATCAA AGCAAATAGG ACATCAAAGA TAACTGTGGG CTTCATTACA
  ATTACAAAAT CTAAGCAAGA TAATGGAAGT TACTTGTAGA CATCTGTTCT AAGATTTTCC
  ACTCCTGTAC TTAGAAATGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322735868	CHEV_8_84903658	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235010986					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:83106388 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Il15	interleukin 15			Intron
				Noncoding-Transcript-Variant
Tssr81957	transcription start site region 81957			694 bp upstream
Tssr81958	transcription start site region 81958			678 bp upstream
Tssr81959	transcription start site region 81959			321 bp downstream
Tssr81960	transcription start site region 81960			506 bp downstream
Tssr81961	transcription start site region 81961			542 bp downstream