rs235016285 SNP Detail

Summary

• ID
  rs235016285
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:37298019 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTGAAATTC AAAACAGGAC CTAGGACCAC
  TCGTTCTTTC AAACAGCCTC TGGTTGGGGT TCAGTCACAC CTGTGCTTGA GAATTGGGGC
  TGCTCAGCTT TTGGGCATCT TTTTCTAAGG AAAACAAATA CATCATCACC TAACCTTGTA
  A
  AGGCCCTTCT TACTGCTGCT AAGATTTTGG AACGACCATC CACACTGCCA TGCTTAATGG
  GAACACACAC ATGGAATCAC ACCACGTAGC TCTAACTCAC ACATCCTCTC AGCTCATCTT
  GCTTTCCCAG TACATGAAAC GAGAAGCAAG                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319691066	CHEV_1_37315783	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235016285					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:37298019 () rs orientation: forward

Symbol	Name	Function Class
Cnga3	cyclic nucleotide gated channel alpha 3	within coordinates
Gm69908	predicted gene, 69908	1419 bp downstream
Rr409496	regulatory region 409496	284 bp distal