rs235020990 SNP Detail

Summary

• ID
  rs235020990
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4562358 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAAATATA TACATACACT
  TACATATATA TATATATATA TACATACACA CATATACACA TACATAAACA CAAAAATATA
  TACATACACT TACATATATA TACATACACA CATATACACA TACAGAAACA CAAAAATATA
  TACATATATA CACCATACAT ACATACACAC ACAAAAATAT ATACATACAT ACATATGTAC
  A
  TACACACACA TTAGTTCTAA ATTCTAGAGA ACACAGGGAT ACTCTGAATA TCCATCTACC
  AGGAGAAAGC TGGCAGTATC CTTGTTGTTC CAGTTGCTAT AGCAAAGTAT CACACTGGGT
  GGCTTTAAAA CAACAAAAAC TTGGTTCTCA CAGTTCTGGA GGCTGGGAAG TCCAAGATGC
  TGAGAGAATC CATACCCTCT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873979	CHEV_12_4519166	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235020990					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4562358 () rs orientation: forward

Symbol	Name	Function Class
2900045O20Rik	RIKEN cDNA 2900045O20 gene	within coordinates
Rr265385	regulatory region 265385	1957 bp distal