rs235101205 SNP Detail

Summary

• ID
  rs235101205
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:50843481 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAAGCATA CTGTTCAACT
  GTTCCTCTTC TCTATGTGGG AAAACCAACA CTTGGAGATA GAGGTCTCCT GTATAAATGT
  ATAAGTTACA TCACATCGTG ATAGATCGAC CCTTGTTTCT ACTCAAATTC TCATCTGCTA
  AGCTTGAATT GTCATTTTGT TTGTTTGTTT TGTTTTGTTT TGGTATGTGA CTACACTGTC
  R
  CTGTCTTCAG ACACACCAGA AGATGATGTT GAATCCTATT ACGGATGCTT GTGAGCCATC
  ATGTGGTTGC TGGGAGTTGA ATTCAGCATT ACTGGAAGAG CAGTTACTGC TCTTAACTGC
  TGAGCCATCT CTGCAGCCTC TTGAATTGTC TTTTTATGAT CAAAGTCACT AATGAGAATG
  AAGAATTTTA AAAATATTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323299456	CHEV_10_50687191	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235101205					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:50843481 () rs orientation: forward

Symbol	Name	Function Class
Sim1	single-minded family bHLH transcription factor 1	within coordinates
Tssr93227	transcription start site region 93227	1976 bp upstream