rs235160144 SNP Detail

Summary

• ID
  rs235160144
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:44776999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTCTCCA CCAAAGCAGG
  AGGCACACAA ACGGGCCTTA CTCAAGGAGT GAGTGATACC CAAATACATG AAAAAGCAAC
  TGTTTCCACG CCCAACAACA CGACTGACAC AGCAAAAGCA GGCCATGACA CAGGTCGGCC
  ACAAACTCCA ACACTTCCGA GACCATCCAG TGAGTGTGGG AGGTGTCTGT GATGGACTCA
  Y
  ACATGTTCCA GCTTCCAGTC AGGACATCTG ACCTAGAGTG CGGGAGGCCA GTAAGATGGC
  TCAGCTCTTA CAGACACTTG CCACCAAGTC TGAGGATCTA AATTCAATCC CTAGGCCTGA
  CACAGTGAAC AAAAGCAACT GACTTCCTCA AGTCATCCTG TGACTCCACG CAAGCACTGT
  GACACACATA CACACACACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324330188	CHEV_13_44718892	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235160144					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:44776999 () rs orientation: forward

Symbol	Name	Function Class
Gm40931	predicted gene, 40931	within coordinates
Gm47805	predicted gene, 47805	within coordinates
Rr283673	regulatory region 283673	within coordinates