rs235194962 SNP Detail

Summary

• ID
  rs235194962
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:111858356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTGGCCAG TGAAGCGGGT
  AAGACAATTG CAGATCTTCA CCTCTCTCTG TGTTCCTTCA AGTCCAATCC CCCAAGTTTA
  TCCTCAGCTC AGTGGCAAAC TTCCTGCCTT AGTTAGCATT TCCATTGCTA TGAAGAGATG
  CCATGACCAA GGCAACTCTT ATAAAGGACA ACATTTTAAC TGGCGTTGGC TTATAGTTTC
  M
  GAGACTCAGT CCATTATCAT CAAGGCAGGA AGCATGGCAG CATCCAGGCA GATATGGTGC
  TGAAGAAGGA GCTGAGAGTT CTCCATCTTG ATCTGAAGTC AGCAAAGAAA AAGAATGACT
  CACGAGCAGC TAGGAGGGTC TCAAAGACCA TCCCACAGTG ACATACTTCC TTCAACAAGG
  CCACACCTAC TCCAACAAGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325913339	CHEV_X_110062268	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235194962					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:111858356 () rs orientation: forward

Symbol	Name	Function Class
Rr2637	regulatory region 2637	1045 bp proximal
Rr6449	regulatory region 6449	1228 bp proximal