rs235257369 SNP Detail

Summary

• ID
  rs235257369
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77957772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAAAGACCA CAGACCCAAT CCAGCATCGG
  TTGTCTGTGA TGCTTGACTG TACAGTTTTA TTTCTCATGT TAGAATCGTT CCTAGCTGAG
  TGTGGTGGGC ATGCCTGGGG AGAAGGAGTA GGAGTGACAG AAAGACTATG CGCATCAAGC
  R
  TAATTTAGGG AAATGCCCAG CGTGGCCTCT GATTCATTGT AAGAATTCAG TCAAAGGAAG
  TTGATaacag ttgggagaaa gaggaaggaa gaccaggaat ttcaagtgac cttctgctac
  atagtaattc tgaggtcagc ctggtctata                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323015295	CHEV_9_77898297	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235257369					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77957772 () rs orientation: forward

Symbol	Name	Function Class
Gcm1	glial cells missing homolog 1	1468 bp upstream
Tssr86256	transcription start site region 86256	1448 bp upstream