rs235261370 SNP Detail

Summary

• ID
  rs235261370
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11889239 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGAAGACC TTTAGATCGG
  AGGGTGTTGA AGCCATGGCG GTTGAAACAG ATGACAGTGG GAATGGTTGA GGTCCCAGAG
  TACGAGGGTG CTGACTTCTC ACCTGTCTCC TGCCATGCTT AGGAAGCCCT GGACTTGTTT
  GTTTCTGTTC TACATCTCAA AGAAGTTCTG CAGATTGTGA GGGGGTGGAA ATTAGCAAGA
  M
  TGTGTAAGAA CCTTGTGAAG ATGTTAATAC TGGTCAATAC TGGCATCAAG GGGTCTCCAT
  CAAAGGGCAG ACACGGGAGA CGACCCAGAC CTGGTCTGAG TAATGACTCA AAGGTGCTCT
  GTGGGCCCAG TTTCTTGGTT CTGGCCGTGG CACTGTGGGC TGGGAGCATG CACACACCTT
  CCCTCGGAAC TCACTGGGGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322494094	CHEV_8_11839239	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235261370					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11889239 () rs orientation: forward

Symbol	Name	Function Class
Gm15875	predicted gene 15875	within coordinates
Rr659647	regulatory region 659647	1992 bp proximal
Tex29	testis expressed 29	1249 bp upstream
Tssr76253	transcription start site region 76253	1262 bp upstream
Tssr76254	transcription start site region 76254	1275 bp upstream
Tssr76255	transcription start site region 76255	1329 bp upstream