rs235336215 SNP Detail

Summary

• ID
  rs235336215
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:44381026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTACTAAA ATGAAAACCG
  ACCGAGTTCC CTGGAAGCCA AATGAAATGG AAAACTTTGT AACTGTGATT TTCAGAAGGT
  TTTCCTCCCG ATGAGTTCCT GGAGCAATGA TCCTCAAATA TGAATGTCCA TTACAGTGAT
  CTGGGGGATA ATATTGATAA ATGAGCCCCA CCCTAGACAT TCTGCCTAAC TTGGTCGATC
  R
  GGCAGGGAAT GTACATGTGT GCTCTTAAAA AGCCTCTCTT GAGGGCTGGG TTCCAGTCAC
  ACTTATTCTC CCTGGTTTAT GGAAGGCAAA TGAATATTCA GTGTTCTGTA GAAGATACAG
  AGATCCTTTA CAAATATTTA AATTCTGTTC TAAATTTTTA TTTTTTTGTG TGATATGGTG
  TGTGTGTGTG TGTGTGTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321100987	CHEV_4_44393898	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235336215					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:44381026 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14212	CpG island 14212	262 bp distal
Gm12455	predicted gene 12455	1896 bp upstream
Gm68903	predicted gene, 68903	within coordinates
Rr89080	regulatory region 89080	775 bp proximal