rs235354680 SNP Detail

Summary

• ID
  rs235354680
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:120757949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACATGTCTT TTGTCCTTGT
  TCAGTATATG TTTGGGCAGT CCTATTGGTA TATATATATA TATCATGAGA AAAAAAACTC
  TCACAGAAAA TTCCGTGATT TATAATATAT TCACCCCTTC ATTCTGCAAT GATTCCTGAA
  CATTTTATGT AAATGTGTTT TATAAATGTA TCTACTAAGA GTCTGCACTT TGATTGGTTG
  K
  ACTTTTCTAG AGTGGTCTCT GCTTCAAAGA GTAGTTACAT AGATGAGAGG TAAAAGCTAA
  ATTTATCTGT GGGTTTAAGA ACAAGTGCAT ATCTTATATC TTGGGTATCC TAGGTTTGGG
  GCTAATATGC AATTATCAGT GAGTACATAT TGTGTGAGTT TCTTTGTGAA TGTGTTACCT
  CACTCAGGAT GATGCCCTCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325960970	CHEV_X_118961861	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235354680					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:120757949 () rs orientation: forward

Symbol	Name	Function Class
Rr395603	regulatory region 395603	792 bp downstream