rs235395073 SNP Detail

Summary

• ID
  rs235395073
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:110255687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGAAGCAA GTTTATGTGG
  AAGATATATT ACCTCCATTT GGGCTCCATA GAAGTGGAGT TTTTACAGAA TATTTGTGTT
  TGAGAGAACT CTAAAGTCCT AAGAGTCACT AAGGAGTCAC ACACAAAGTA TACAAATCTT
  GTCCTTAAGA AGGCAAGAGA CTTGAAGGGT CACCCAACCA AAGGAGTCGG GAGTGCATAC
  R
  TGTATTTGGG GTCTTGAAGG TCATTCAGAA TTACGAAGGG TTACATGTCC TATCTCTGTG
  AGTATAAGAT AGCCTTTAAG TAGCAGGGAT TCTGATAAGA ATGGAAACTC AGGATTCTGT
  TTCTTAAGGG TATCCTTATG GGTCTGGTTG GACTTAGAGA ATTAGTAACC AACGTGCTTT
  ACAGGCTAAT AGAAGAAAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321256584	CHEV_4_110071095	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235395073					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:110255687 () rs orientation: forward

Symbol	Name	Function Class
Agbl4	ATP/GTP binding protein-like 4	within coordinates
Cpgi14588	CpG island 14588	487 bp distal
Rr597431	regulatory region 597431	689 bp distal
Rr597432	regulatory region 597432	112 bp distal
Tssr38370	transcription start site region 38370	782 bp downstream
Tssr38371	transcription start site region 38371	727 bp downstream
Tssr38372	transcription start site region 38372	682 bp downstream