rs235400356 SNP Detail

Summary

• ID
  rs235400356
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:45627076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGTGGGTT TTAACTATGA
  AAGGTAGAAA AGTGCATTGC AAACAAGCTT TAAGGCAAGA AAAGTTCTGC AGTATGCTTT
  CATTGGACAT GAGCGTTTAT ATACAGCTTT CAATATGCCT TTTATGGAAT ATAAAATAAA
  GGAGAATTGC TCTTATATAA ATTGAGAGTT CTTATTGATA ATAATATATC ATGGTTGACA
  M
  ATGCCACATA TGATGGGAAA AATTGTGTAT GAAATATGGG GTGTGGCAGG GCATATGGGA
  ATTCCCTCTT CATTGTTGTA AAACAAAAGT ACCCTAAAGA ACAATGCTTA TTCATTAAAA
  AACATAATTT TTAAAAAGTG GTTACTTTGA TATTACATAA TTCTTTCAAC ATTTCAATAT
  TTTGGAGGTT TCCAATTTGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320276509	CHEV_2_45592584	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235400356					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:45627076 () rs orientation: forward

Symbol	Name	Function Class
Gm13465	predicted gene 13465	within coordinates
Rr556487	regulatory region 556487	461 bp distal