rs235433397 SNP Detail

Summary

• ID
  rs235433397
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5818587 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGATCTGAC TCTCCTTCCT CCCCAGCACT
  CTGTGTGGCA CCCATGAGGA ACAGAGCAGC AATGCAAGTA TGAAGTGACT GGTAGGTCAT
  TGCTGAGTGA CAGGGGAGTC ATCAAACACC TGCCGTGTGC TCACCTGTAT ACAGCAGCCC
  R
  CACTACCCGC CCCCACAACG Tgtggattca acaaccagac agcaaaatta tcaggaaaga
  aagcattgcc ggtactacat atgtacagcc tgccttttcc tgccatagtt tgcccaaata
  tcatgatata gtaactattt acacaggacg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325717447	CHEV_19_5768559	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235433397					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5818587 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10479	CpG island 10479	1943 bp proximal
Rr363624	regulatory region 363624	1213 bp proximal
Scyl1	SCY1-like 1 (S. cerevisiae)	within coordinates