rs235450455 SNP Detail

Summary

• ID
  rs235450455
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:84351812 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTGTGTCAG TCTCTGGTGG GAACAGAGGC
  TTGGTTCAGA CAAAAGCCAC TCACCTCCCC CCACCCCCAG GGATACGGCC AATCTCTAcc
  cctcctcctc acctatacag ccctcctcca ttctccccaa ccctccagcc ctcctcccca
  R
  ccctcctcca ttctccccaa ccctccagcc ctcctcccca gccctcctcc atcctcccca
  gccctcctcc attctcccca gccctccagc cctcctccat cctccccagc cctcctccat
  tctccccagc cctccagccc tcctccatcc                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323369363	CHEV_10_83978693	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235450455					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:84351812 () rs orientation: forward

Symbol	Name	Function Class
E230014E18Rik	RIKEN cDNA E230014E18 gene	within coordinates
Gm34405	predicted gene, 34405	within coordinates
Rr217061	regulatory region 217061	1412 bp distal
Rr217062	regulatory region 217062	12 bp distal
Rr229121	regulatory region 229121	within coordinates
Rr230499	regulatory region 230499	1444 bp distal
Tssr3295	transcription start site region 3295	1823 bp upstream
Tssr94890	transcription start site region 94890	762 bp upstream