rs235480365 SNP Detail

Summary

• ID
  rs235480365
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:88627331 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGG AGAGACTGGA CTCTACAATG
  Y
  TGTTTTCTTG GTCTCTGTAT ACATA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320836107	CHEV_3_88523946	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235480365					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:88627331 () rs orientation: forward

Symbol	Name	Function Class
Rit1	Ras-like without CAAX 1	within coordinates
Rr579876	regulatory region 579876	1894 bp distal
Rr579877	regulatory region 579877	302 bp distal
Rr579878	regulatory region 579878	825 bp distal