rs235565061 SNP Detail

Summary

• ID
  rs235565061
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:174572892 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATGGTCAT TGGCTTTCTT
  TCTTTTTTTT TTTTTTTTCT TGATGTTTGA TGCTACATTC CTCAACCTTG CTGTTCCTTC
  TTGACATTCT CATTCTTTCT TCTGGTAGGT TGAGTCTATT TGATAATTCT TCACAGTTTA
  TTTTTCTTTA TTTTATTTAA TTCTTTCTGG TTTTTAACTA TTATTTCAAA TTAAAGTTTT
  M
  CTATTATTTT AAATTAAAGT TTTTAAAAAA TAGAAGGATT TGAATAATAT TAAATTCTTG
  ATGATTCTCT TTTTGGCACT GGATATGTTT CATCCATGCT GCAGACTTTC TATTTTTGGC
  TTTTCTCTCC AAGTCATGGA TTGATTATGC CTGTTTGTCC ATCCACGTAT TTTTGATTTC
  TTTGAGGTTG TAGATCACTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320144164	CHEV_1_176675457	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235565061					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:174572892 () rs orientation: forward

Symbol	Name	Function Class
Fmn2	formin 2	within coordinates
Gm51689	predicted gene, 51689	935 bp downstream