rs235578192 SNP Detail

Summary

• ID
  rs235578192
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:60803885 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCAGGCAG GGTTGCAGGG
  CACCCTCAGG GCTACCCAGA GAGTGAATTT GGTCTCATTG GTAACAACTT ACAAGAACTA
  ACTCAAGGTC CTACAAGACT TATTTTATCA TCTGTCCCTC TCAGGACACT TGCCACGGAA
  CCTCCCAGCC CCCATCTAGC CCCATCCCTT TGTGGTCTTA GCCTATCAGC AAGCCTGTAA
  Y
  ATATAAATTC TTCCCAGACA AAATCTCATC TATGCACACT GTCACAGATG GCTCTGATAG
  TCCCCAAGGC CATATCCTTC TCTTTTCCCA CTGTTGTGAG GGGAAGGGGC TCAGGGGATG
  TGGGGGCTGA TGTCCACCTG GCTCCTCAGA AACTGGAGGA GCGGCAGGAG GATCCTGCTG
  GGATGGCACA GTGAGGTCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324366856	CHEV_13_60757432	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235578192					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:60803885 () rs orientation: forward

Symbol	Name	Function Class
Dapk1	death associated protein kinase 1	within coordinates
Rr273140	regulatory region 273140	1685 bp distal
Rr276884	regulatory region 276884	within coordinates
Rr284608	regulatory region 284608	1449 bp distal