rs235609415 SNP Detail

Summary

• ID
  rs235609415
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:38304051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGGAAGAG ATGCTTTTTT TTTTTTTTTC
  TGAAGGCCCC TTTTCTCTCT GGTTTCAGTG TTTCCTTGCC ATGTTGGTGA AGCCTTCCTT
  GATAGCTCCA GGCTGAATTA TTTGCCTGCC TCTCCTCCAA AGCAATGTTA TAAGTAAGGA
  K
  atatatatat atatatatat atatatatat atatatatat atatGTTATT GCAAAACCCT
  TTTATAGTAT TGAATCCTGC CCACACCCCA CTCAGATCTA AACTCCTATA AGACAGTGGT
  CATTTCATAA TGTCCCTTCA tatatacact                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324928924	CHEV_15_38233562	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235609415					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:38304051 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7049	CpG island 7049	1813 bp distal
Gm35248	predicted gene, 35248	within coordinates
Rr501361	regulatory region 501361	710 bp distal