rs235655478 SNP Detail

Summary

• ID
  rs235655478
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:69629305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGAGCCTGCT CAGCTCGCCC GGTCTCCCGT ATCCCCACCC
  ACTCACTCCA TAGGCCCCGC CCCTTGCTAC ACGTGTATTC TTTGACCCCG CCCACCCGTC
  M
  CCTTCTCCCG CACCCTTCAG CACGCGGGAT TTCCGGTTCT CCTATCGCGA GATCTTCGTA
  GGTGTGTAGC GCGGCTGAGG TAGCCGGTAG TGCGTCCTG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320793714	CHEV_3_69525894	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235655478					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69629305 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13262	CpG island 13262	within coordinates
Nmd3	NMD3 ribosome export adaptor	49 bp upstream
Rr77744	regulatory region 77744	within coordinates
Rr397719	regulatory region 397719	within coordinates
Tssr29546	transcription start site region 29546	24 bp upstream
Tssr29547	transcription start site region 29547	117 bp upstream