rs235710598 SNP Detail

Summary

• ID
  rs235710598
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117584421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGACATTT TTTTCAAATG
  TTACTCCATG TGGGAGGCTC AGCTTACTGG AAAGTGCCAT CTTTCTGTAG GTGGTTCTGG
  GTTAGATCAA GCAGGCTGAC CAAACCCTAG GAAGCAAGCT GCCAGGAAGC AGTTACTAGA
  GGGCCTCTGC TTCAGTGCCT GCCCTCCCGC CCCTCACTGA TGGAATATTA ACTAAAAGTG
  Y
  AAGGTAAAAT AAGCCCTTTG CTCCCCAAGT TTCTACAGCA GGAGAAACCC TAGGGCACCG
  CTTGCTTAGC CTTACCAAGG ACAGTCCCTG TTTTCTTTTT CTTTCTTTTT TTTTTTTTTC
  CGAGACAGGG TTTCTCTGTG TGGCCCACGC TGTCCTGGAA CTCACTCTGT AGACCAGACT
  GGCCCGGAAC TAAGAAATCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499201	CHEV_10_117185572	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235710598					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117584421 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2239	CpG island 2239	1861 bp distal
Gm66856	predicted gene, 66856	493 bp downstream
Rr439612	regulatory region 439612	1675 bp distal