rs235719009 SNP Detail

Summary

• ID
  rs235719009
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:122871392 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTAGCTGT CCAAGGGACA
  CTGAAGTCTT ACTTTCAGTG ACAAGGAGAT GACCTCTCCA GGCAAGACCA GGAACTCGGC
  TTCCCAGAAA ACTCAACTTT GTCCTTTAGC CTCAGCACTC CTTAGCTATA GGACCACAGT
  AGGGGACAGA GGCAGTCTGG TGACACTGGT GGCATTCTCA GTGGTCTAGG CCATGCTGAC
  R
  GGGTGTTCTG GGAAACTGCT TCTGATAAAC CAGCCCCCTT GGAGGCACCG GGTGCAACAA
  GCTCATGCTA CATGGAGACC TGAAGGCAGC CGGCTGTGAG GACCTTGGGA AGGGAGAATG
  TTGAGCAACC AGGAGAGTCC TGACTCAGTC TGCTGTCTGG GATGCAGGGC TGATTCTCAG
  GCCTGCTTCT TGTTGGAGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322848686	CHEV_8_124668553	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235719009					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:122871392 () rs orientation: forward

Symbol	Name	Function Class
Gm39268	predicted gene, 39268	1109 bp downstream
Gm56875	predicted gene, 56875	within coordinates
Rr174877	regulatory region 174877	992 bp distal
Rr179926	regulatory region 179926	1809 bp proximal
Rr188324	regulatory region 188324	within coordinates