rs235724303 SNP Detail

Summary

• ID
  rs235724303
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117584350 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGTCAATT TGGGAAGAGA
  GACGCTCAAT TAAGAAACTG CTGCCAGCAA GTCAGCCAGA AGATGAGCCC GTGGGACATT
  TTTTTCAAAT GTTACTCCAT GTGGGAGGCT CAGCTTACTG GAAAGTGCCA TCTTTCTGTA
  GGTGGTTCTG GGTTAGATCA AGCAGGCTGA CCAAACCCTA GGAAGCAAGC TGCCAGGAAG
  Y
  AGTTACTAGA GGGCCTCTGC TTCAGTGCCT GCCCTCCCGC CCCTCACTGA TGGAATATTA
  ACTAAAAGTG CAAGGTAAAA TAAGCCCTTT GCTCCCCAAG TTTCTACAGC AGGAGAAACC
  CTAGGGCACC GCTTGCTTAG CCTTACCAAG GACAGTCCCT GTTTTCTTTT TCTTTCTTTT
  TTTTTTTTTT CCGAGACAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499198	CHEV_10_117185501	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235724303					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117584350 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2239	CpG island 2239	1790 bp distal
Gm66856	predicted gene, 66856	422 bp downstream
Rr439611	regulatory region 439611	1954 bp distal
Rr439612	regulatory region 439612	1604 bp distal