rs235790699 SNP Detail

Summary

• ID
  rs235790699
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:39006770 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGACTCTA GTCATTGTAG
  CAAAAAAACT TTGATGTGTG TGTGGTAAAA CAGAAACAGT ATCCACAAGG AAAGATTTGG
  CACTTACAGT AATGAAGAGG ACAATTGTGG ATTCTATCAC TTTAGTTCTG TTCTTGAATT
  TTAGGTAGGG CAATCAGAAA GCTAAATGAA TTTTAAAAGT TCCATGCTCG AAAGCAAACA
  S
  TAAAATTGTC CTTACATATG AATGATTATT AAAAAAATAT AAATGAGTTC ATAGAAATTT
  CATAATCTAA TAAGAATATC TATTAGAAAT AAAGAATAAT ACAATAAATT ATAGGGTACA
  AGATTCTCAC AAAAGCTTGT TTGGAATTTC ACAAACTACA TATATGACCA GGGCTCTTCT
  TTTTCTGTAA GCCTGTGGTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322911090	CHEV_9_38903059	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235790699					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:39006770 () rs orientation: forward

Symbol	Name	Function Class
Gm47085	predicted gene, 47085	1493 bp upstream