rs235816098 SNP Detail

Summary

• ID
  rs235816098
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:115819633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAAATCCTG AGGTCCTAAT TCTGTGTGTA
  CCGTTGTGGC GGCAGGTGTT TGTTTTGGCT TGGTTGTCCC TAAGTGCCAG CTTGAGTGAG
  CCGGCATAAG TGGCCTGCTG GCTCTCCCAC TGAGCATATA CTAATAATAG TTGGGCTTCG
  M
  AAGCTATGTT GCAGATTGCC TGAGTCCAGA ACTGTGTGCA GATCTTCTTG ATTAAATATT
  GTGCTATCCT AGTTGATTAT ATTTGCAGTA AGTCCTCCCT AAGGCCACAT AGCACCATGG
  GACTCGAAGG GCAGGTGGTG ACAGCACTGT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320893980	CHEV_3_115728902	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235816098					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115819633 () rs orientation: forward

Symbol	Name	Function Class
Extl2	exostosin-like glycosyltransferase 2	Intron
Rr583641	regulatory region 583641	within coordinates