rs235821253 SNP Detail

Summary

• ID
  rs235821253
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:75066686 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATCAGGAA TGACCAGGGG
  CAGACAAATA GGTCTATAGT TTTCTCTAGG AACTCCAGGT TTAACAAGTG TTCCTTGTGT
  AGGTGGCCCC CAGGGATGTG CATGTGGTAG TTCATTCCGC ATGGTGGGAA GTAACTCTCC
  ACTTGTTGGG ACTCGGAACT GTTCTGATTC TTGGGAGGGC TCTTCACTTC AGACATGGGC
  M
  CTTCTGTGTG TTCCACCTAA TAGAGCTCTG CTTGAACCCT CTCCTCCCTT TTTCCTGGTA
  GAGCCAGGGC CTACAGACCA CTCACATGAA CCTTTGCCTT TATTTATAGG GCTACCAAGT
  ACAGGTCATC CTGTCCCCCA GCTTGGAGCT GACACAGGGG GCTGCCTATG ACTGCCAGTG
  GTCTGAGTAC TAACTTGCAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323750387	CHEV_11_74989362	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235821253					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:75066686 () rs orientation: forward

Symbol	Name	Function Class
1700016P03Rik	RIKEN cDNA 1700016P03 gene	368 bp downstream
Cpgi3254	CpG island 3254	1809 bp distal
Dph1	diphthamide biosynthesis 1	1783 bp downstream
Ovca2	candidate tumor suppressor in ovarian cancer 2	83 bp downstream
Rr451080	regulatory region 451080	1553 bp distal