rs235825105 SNP Detail

Summary

• ID
  rs235825105
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:119801609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             AAGGAGTCAC AGGAGGATAA GCTGAGGTCC CAGGAGCTGC TCTGGACGGC
  S
  TCCCCCTCAG GGGACCCAGA ACTGCCAGGG AGGCTACCTT CTCTCAGCCC           
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323223773	CHEV_9_119881661	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235825105					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119801609 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22487	CpG island 22487	1576 bp proximal
Csrnp1	cysteine-serine-rich nuclear protein 1	Coding-NonSynonymous
Rr688588	regulatory region 688588	1013 bp distal
Rr688589	regulatory region 688589	1604 bp distal
Rr688590	regulatory region 688590	1515 bp proximal