rs235844668 SNP Detail

Summary

• ID
  rs235844668
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:69570694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTGATTAAT TGTTCCATCT TAGCCTCCAA AATCATAGGA
  TTAGTGTGTG CCTAGACGGG CCTTTAAAAT TAAGGCTTAA ATCGGGTGGT GGCGGCGCAC
  R
  CCTTTAGTCC CAGCACTTGG GAGGCAGAGG CAGGCGGATT TCTGAGTTCG AGGCCAGCCT
  GGTCTACAGA ATGAGTTCCA GGACAGCCAG GACTACACA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323731034	CHEV_11_69493370	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235844668					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69570694 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3142	CpG island 3142	1399 bp proximal
Gm73989	predicted gene, 73989	1359 bp downstream
Rr450067	regulatory region 450067	1257 bp proximal
Rr450068	regulatory region 450068	1968 bp proximal
Senp3	SUMO/sentrin specific peptidase 3	within coordinates
Tssr108773	transcription start site region 108773	773 bp downstream
Tssr108774	transcription start site region 108774	1925 bp downstream
Tssr108775	transcription start site region 108775	1954 bp downstream