rs235857170 SNP Detail

Summary

• ID
  rs235857170
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18299550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCC TCCTCCTCCA CCCCTGCACA
  Y
  AATCCTCATT TTCTGAATTG TTTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322115403	CHEV_7_19150974	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235857170					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18299550 () rs orientation: forward

Symbol	Name	Function Class
Psg27	pregnancy-specific beta-1-glycoprotein 27	within coordinates
Tssr2095	transcription start site region 2095	1924 bp downstream
Tssr64739	transcription start site region 64739	535 bp downstream
Tssr64740	transcription start site region 64740	514 bp downstream
Tssr70834	transcription start site region 70834	1566 bp downstream
Tssr70835	transcription start site region 70835	1662 bp downstream
Tssr70836	transcription start site region 70836	1693 bp downstream
Tssr70837	transcription start site region 70837	1749 bp downstream
Tssr70838	transcription start site region 70838	1893 bp downstream