rs235866885 SNP Detail

Summary

• ID
  rs235866885
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr13:4294467 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCATGGGAC TGATTCTCCA
  GAACTCTTAT AAGATTCCAA GTGGATGTGG TGCTCTCCTC TATCTCCAGC CTTGTCGGCA
  GACAGGGGAT CCCCAGAATA ATCCGGCAGG TGAAAATAGC CATATTGGTG AGCTCTGATC
  TGATGGAGAG ACCCTCCCCT AGGAAATGAG GTACAATTGC TAAGAGGATG AAGCCTGATA
  W
  AAACCTCAGG TTTGCACACA CACACACACA CACACACACA CACACACACA CACACCCATG
  CAAACAAGAA TAAACATATA CATTCATACA TATATTTATT CATTCACTCA ATATATATAT
  TCATGAGCTA AAGCTCTTCT TTTTATTGTG ATTATTCCTT TACTTTGTGG TTAAATATGT
  TCTTTCTTCA TTAAGAATAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324213463	CHEV_13_4243714	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235866885					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:4294467 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Akr1c19	aldo-keto reductase family 1, member C19			Intron
				Noncoding-Transcript-Variant
Gm61344	predicted gene, 61344			within coordinates
Rr474456	regulatory region 474456			490 bp proximal