rs235883812 SNP Detail

Summary

• ID
  rs235883812
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:102269144 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTCTTTTTC AATCCTCACT CCTTCCTTTG AGACCCTGTT
  GACGGACTGA GCTGGTTTGG TCCTTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  Y
  GCGCGCGCGC GCAGGTGGTG TTGTATGTTA TGTATGTGCA GACACCATAT AGTCCAGAAG
  AGCACACTAC CTCCCTTGAA GCTTGAATTA TAGGCCTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323429469	CHEV_10_101895917	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235883812					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:102269144 () rs orientation: forward

Symbol	Name	Function Class
Gm47025	predicted gene, 47025	945 bp upstream
Gm47101	predicted gene, 47101	1986 bp upstream
Rr438361	regulatory region 438361	1817 bp proximal
Rr438362	regulatory region 438362	1997 bp proximal