rs235893505 SNP Detail

Summary

• ID
  rs235893505
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136937548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TATCCTGAG GCAGGATTGG ATTTTGAGCA
  GTGTTGGCGA TTTGTTTTTT GGGAGTACAA AGCAAGCAAT AAATCTGTCA CCCTGAAAAA
  ATCAGGTTGT GACCTAAAGA AGGAGCAAAT TGTGACTTCA GGTAAAAAAG AGTGACCTAC
  Y
  AGGGAGGGTA ATTCATCATG ATAACAAAAA TGCCGGGCGC TCTCCAGGCC TGCCCAGGAG
  AAGGGCCGCA GTAAGCACAT TCAGGAGATG CAAGTGTCCA AATATTTTAA ACTGATCAAT
  ATTTCCAGGG CTCACAAGCA GCCCAAACCC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319997363	CHEV_1_138906387	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235893505					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136937548 () rs orientation: forward

Symbol	Name	Function Class
Gm70790	predicted gene, 70790	within coordinates
Rr419562	regulatory region 419562	458 bp proximal
Rr419563	regulatory region 419563	564 bp proximal