rs235920254 SNP Detail

Summary

• ID
  rs235920254
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12505339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGCTAGTT GTTTCAGCTG
  GTCTTCAGTA GAAGTAGGTT CCAATGGATA TGCTGGCAAG TAAGTGTAAG CAGGTGAAGT
  GTAAGACTCT GGAGAGCCTT AGCTTACCAG GGACCCCCTG AGTGAACCAC ATGGAGCTGG
  AATTGATGCA AAAAGCAAGA GTAATTTATT GTTCCAGTGC ACTGGGGTCG TCCCAGACCC
  R
  AAGGAGAGGT GGCAACTACC TGAAGCCGGT TTGGTGAGTT CTTATATGGT TTCCAGGGGC
  AGAATAGAGC ATCAGCAACT AGGCACAATA TTATTGGCGG AACAGTGTGC CCTTTAAACT
  GATTGGTCTT TAGGGAATGA GGTAGTAGGG GCTTACTCAG CCTCTCCCTT CTGGCCTAAG
  TGCTCTCTGA CCTGTCTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322498748	CHEV_8_12455339	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235920254					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12505339 () rs orientation: forward

Symbol	Name	Function Class
Gm56835	predicted gene, 56835	within coordinates
Rr381713	regulatory region 381713	within coordinates
Tssr76284	transcription start site region 76284	1901 bp upstream