rs235924615 SNP Detail

Summary

• ID
  rs235924615
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144940474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTAG AAAATGTGCA AGCTCTGGGT
  G
  CAGATGAGAG CCCTGCCTCA GTAAC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321412968	CHEV_4_144803807	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235924615					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144940474 () rs orientation: forward

Symbol	Name	Function Class
Rr87265	regulatory region 87265	327 bp proximal
Rr103536	regulatory region 103536	675 bp distal
Rr103537	regulatory region 103537	within coordinates
Tnfrsf1b	tumor necrosis factor receptor superfamily, member 1b	within coordinates
Tssr40194	transcription start site region 40194	25 bp upstream
Tssr40195	transcription start site region 40195	377 bp upstream
Tssr44484	transcription start site region 44484	1119 bp upstream
Tssr44485	transcription start site region 44485	1053 bp upstream
Tssr44486	transcription start site region 44486	231 bp upstream
Tssr44487	transcription start site region 44487	176 bp upstream
Tssr44488	transcription start site region 44488	59 bp upstream
Tssr44489	transcription start site region 44489	1 bp downstream
Tssr44490	transcription start site region 44490	294 bp downstream
Tssr44491	transcription start site region 44491	461 bp downstream
Tssr44492	transcription start site region 44492	686 bp downstream
Tssr44493	transcription start site region 44493	847 bp downstream
Tssr44494	transcription start site region 44494	1081 bp downstream
Tssr44495	transcription start site region 44495	1142 bp downstream
Tssr44496	transcription start site region 44496	1211 bp downstream
Tssr44497	transcription start site region 44497	1334 bp downstream
Tssr44498	transcription start site region 44498	1459 bp downstream
Tssr44499	transcription start site region 44499	1502 bp downstream
Tssr44500	transcription start site region 44500	1590 bp downstream
Tssr44501	transcription start site region 44501	1650 bp downstream
Tssr44502	transcription start site region 44502	1746 bp downstream
Tssr44503	transcription start site region 44503	1862 bp downstream
Tssr44504	transcription start site region 44504	1928 bp downstream