rs235943186 SNP Detail

Summary

• ID
  rs235943186
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:99687899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAGGGATT TATTATTGGA
  ATTTTACATT TTTCTCTCAT AAAATATATT CCAGCCACAT TCTTCCCTTC CTCAATCCAC
  CAGGGTCCCC AGCACTTCTC CTCTCCACCT GATCCACTCC TCAATTTCCC TTCAGAAAAG
  AGCATCCTTC CCAGGGATAT CAACTGAACA TGACACAACT TAATAAGACT GGGAATAAAC
  Y
  GCCTCTGGTC AAAGCTGGAT GAGACAAAGG GAGTAGGAGG AAAAGGGTCC TAAAACAGTC
  AAAAGAATCA CAGACACCCC CACTGCCATT GTTACAAGCA CCACAAAACC CCCAAACAAA
  ATAATCACAG CATATATGCA GACATACTAG CACGGACCCA TTAAGGCTCC ATGGTTGCCC
  TGTTAGTCTC TGTAAGCTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323829342	CHEV_11_99658387	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235943186					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:99687899 () rs orientation: forward

Symbol	Name	Function Class
Krtap4-21	keratin associated protein 4-21	991 bp downstream