rs235953936 SNP Detail

Summary

• ID
  rs235953936
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128357571 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGTCAGATC TCCCCAGGCA
  CAGTGAGGAC TTGGAGGCAC AGGCTAAAGT GTCCTGCTTT GTATCTCTGA ACCTCTGCCC
  AGGATTGGGA TATTTGGGAG GGTGCTCAAT ACCTAAGTCC TGGGATATCT AGCAGGTTGG
  TCATCCCTGT CCAGTTGATG TCAAGCGTCT GGAACAGAAG GGCAGAAGTC AGGACAGATC
  Y
  TAGAGAGCAT GGGCATGCTT AGCCTCTGAT CAGTGTTCTC AGTGTCCATA GCTACCTATC
  TGTACCACCT CTCTTCCCAA ACCCACGTCC CATGTCTCCC ATCTCCCACC AGTGCTCTCC
  TTACCGGGCG TTTGATAAAG AACATGGACA CAGCCCCCAC GATAGGAAGG TCCCCTGTGA
  GTGGCTCAAG AATCACTCGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323534392	CHEV_10_127958758	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235953936					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128357571 () rs orientation: forward

Symbol	Name	Function Class
Esyt1	extended synaptotagmin-like protein 1	within coordinates
Gm29585	predicted gene 29585	561 bp upstream
Tssr99885	transcription start site region 99885	954 bp upstream
Tssr99886	transcription start site region 99886	763 bp downstream