rs235960081 SNP Detail

Summary

• ID
  rs235960081
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:30716412 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCATA ATGTGGATGG GTTTTGGAAT
  G
  ACCCCCCCTC CCCAACATCT GTAGC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320221221	CHEV_2_30681920	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235960081					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:30716412 () rs orientation: forward

Symbol	Name	Function Class
Asb6	ankyrin repeat and SOCS box-containing 6	within coordinates
Cpgi11456	CpG island 11456	1106 bp proximal
Rr56587	regulatory region 56587	within coordinates
Rr396874	regulatory region 396874	1803 bp upstream
Tssr23394	transcription start site region 23394	1782 bp downstream
Tssr23395	transcription start site region 23395	1801 bp downstream
Tssr23396	transcription start site region 23396	1828 bp downstream