rs235976521 SNP Detail

Summary

• ID
  rs235976521
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:63401346 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAGTCAGC AGTCTGTCAG
  TCACCATAGG GAACAATGTG GGCCCCTTCT AAATCTCTTT TCCAGAAACC TGCTATGGTT
  TAACTGTGCA ATAAAAAGAC CCACTTGAAA ACTGTCATTA TTTGACCAGG CTCGGAGTTT
  ACCCAATAAT AAGCTTACGT CTGCACAGTG CATTTGATAA AAACAGTAGA GTCTGAAAAG
  Y
  AAAATTCCCC GAAGGCTGAA CCTAAAAGGC TGCGGGCTGA TGGGAACTTC AGGAACTGTA
  GAGAAATTTT GGTGCAGATC CAGTCCAAGG TTCTTAGACG CCTTTAGCCC CCTTCATAGC
  CTTTCACTGC TCACCTCGGT GTCTGTCCTA ACATTCTCCT GAGTATTGAA TGAAAGATTT
  CAAGATATAT TAACTAAAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320790002	CHEV_3_63297847	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235976521					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:63401346 () rs orientation: forward

Symbol	Name	Function Class
Rr577573	regulatory region 577573	within coordinates
Rr577574	regulatory region 577574	700 bp proximal